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Fig. 1 | BMC Bioinformatics

Fig. 1

From: mycelyso – high-throughput analysis of Streptomyces mycelium live cell imaging data

Fig. 1

Streptomyces lividans TK24 cultured in planar growth chambers analyzed with mycelyso. a quadratic crops of the raw image sequence at four time points, showing mycelium outgrowth from the spore; b intermediate segmentation results of the raw images in a; c overlay of images and graph representation, with larger hyphae length annotated (in µm); the skeleton consisting of junction/tip points (circles) and connecting edges is shown in grey, numbers refer to skeleton (i.e. corresponding mycelium) lengths; d whole mycelium data as generated by mycelyso: total mycelium length over time as used for mycelium growth rate determination; e-g tracks of individual hyphae, denoted in red, with e showing elongation of the main hypha; h hyphae length increases over time allowing for assessment of heterogeneity in tip elongation rates

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