From: mycelyso – high-throughput analysis of Streptomyces mycelium live cell imaging data
Level | Metric | Fits |
---|---|---|
Per position and time | Image dimensions | |
Crop values | ||
Covered area | Linear/logarithmic1, raw/optimized2 | |
Total mycelium length | Linear/logarithmic1, raw/optimized2 | |
Branching point count | Linear/logarithmic1, raw/optimized2 | |
Tip count | Linear/logarithmic1, raw/optimized2 | |
Per hypha track | Start/mid/end time point | |
Duration spanned | ||
Count of time points spanned | ||
Minimum/maximum length | ||
Minimum/maximum node hop count | ||
Per hypha and time | Time point | |
Length | Absolute/relative3, Linear/logarithmic1, Raw/optimized2 | |
Node identifiers | ||
Distance in node hops | ||
Node identifiers of the successor segment |