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Table 3 Simulated drug profiles

From: Influence of batch effect correction methods on drug induced differential gene expression profiles

Drug Drug samples Control samples Total sample size DEG in unsimulated data
monastrol 8 8 16 22
LY-294002 12 12 24 403
colchicine 6 25 31 21
alprostadil 7 26 33 18
nocodazole 5 29 34 1060
felodipine 7 36 43 72
vorinostat 12 71 83 5145
fulvestrant 40 88 128 1453
trichostatin A 128 709 837 6481
  1. Note: drug, the drug of which the simulated data were generated from. DEG, differentially expressed genes, that is, the number of genes that were simulated to be differentially expressed due to the drug effects