From: Influence of batch effect correction methods on drug induced differential gene expression profiles
Drug | Drug samples | Control samples | Total sample size | DEG in unsimulated data |
---|---|---|---|---|
monastrol | 8 | 8 | 16 | 22 |
LY-294002 | 12 | 12 | 24 | 403 |
colchicine | 6 | 25 | 31 | 21 |
alprostadil | 7 | 26 | 33 | 18 |
nocodazole | 5 | 29 | 34 | 1060 |
felodipine | 7 | 36 | 43 | 72 |
vorinostat | 12 | 71 | 83 | 5145 |
fulvestrant | 40 | 88 | 128 | 1453 |
trichostatin A | 128 | 709 | 837 | 6481 |