From: CAGEfightR: analysis of 5′-end data using R/Bioconductor
Technology | Acronym | RNA state | Ref. |
---|---|---|---|
Cap Analysis of Gene Expression | CAGE | Steady-tate | [5] |
Nano CAGE | NanoCAGE | Steady-state | [6] |
Super Low Input Carrier CAGE | SLIC-CAGE | Steady-state | [7] |
no-Amplification non-Tagging CAGE | nAnT-iCAGE | Steady-state | [8] |
Transcription Start Site Sequencing | TSS-Seq | Steady-state | [9] |
RNA Annotation and Mapping of Promoters for the Analysis of Gene Expression | RAMPAGE | Steady-state | [10] |
Single-cell Tagged Reverse transcription | STRT | Steady-state | [11] |
Precision Nuclear Run-on Sequencing for RNA Polymerase II Start Sites | PRO-Cap | Nascent | [12] |
5′ Global Run-on Sequencing | GRO-Cap/5′ GRO-Seq | Nascent | [13] |