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Table 5 Performance comparison of gene prediction tools on the second O. sativa data set with the transition probabilities divided into three equal parts

From: GPRED-GC: a Gene PREDiction model accounting for 5 - 3 GC gradient

Program AUGUSTUSGPRED-GC
   lowT=0.31lowT=0.49lowT=0.30lowT=0.60
   highT=0.52highT=0.52highT=0.50highT=0.70
BaseSen0.8590.9420.9500.9370.840
levelSpe0.6190.6070.5970.5900.622
ExonSen0.6700.7680.7810.7480.630
levelSpe0.5520.5460.5530.5200.559
GeneSen0.3550.4000.4000.3550.365
levelSpe0.1910.2110.2050.1770.204
Time(Sec.) 48.260.260.860.859.0
  1. The transition probabilities were divided into three equal parts. Bold number indicates that sensitivity or specificity of GPRED-GC are higher than those of AUGUSTUS. Time (Sec.) is the running time of AUGUSTUS and GPRED-GC under different sets of thresholds on the second O. sativa dataset in seconds. Note: The total running time of prediction is presented
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