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Table 3 The prediction results by our method, ZRANK+FiberDock and ClusPro on Benchmark v4.0

From: Identifying protein-protein interface via a novel multi-scale local sequence and structural representation

SubsetaNo. of casesOur MethodZRANK+FiberDockClusPro
  IrmsdFnatFnonnatIrmsdFnatFnonnatIrmsdFnatFnonnat
Rigid1232.8669%35%3.3156%49%3.3355%51%
Medium293.3559%39%4.4639%59%4.7130%69%
Difficult245.3936%58%6.1828%67%6.5321%77%
Overall1763.2863%39%3.8949%53%3.9946%58%
  1. aSubset is based on the magnitude of conformational change after binding