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Fig. 11 | BMC Bioinformatics

Fig. 11

From: Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging

Fig. 11

BALB/c spleen (slide 1) CODEX image segmentation/quantification results. a ~ 200 cells with DRAQ5 nuclear stain (above) and corresponding cell/nucleus segmentation (below). b ~ 71 k cells in stitched, downscaled 9072 × 9408 pixel image showing IgD (green) and CD90 (red) expression as well as location of CD169+ marginal zone macrophages as white dots. c Double positive cell population rates post cleanup-gating with expected percentages in green

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