Table 4 Comparison between the number of annotated instances per level for FunCat 2007 and FunCat 2018

Cellcycle

Train

1628/1610/1472/975/303/11

1628/1552/1474/1057/370/16

Test

1281/1272/1163/766/245/8

1281/1222/1159/815/274/15

Valid

848/836/756/492/164/10

848/804/755/532/192/13

Church

Train

1630/1612/1474/976/302/11

1630/1554/1476/1059/372/16

Test

1281/1272/1164/764/243/8

1281/1222/1160/813/272/16

Valid

844/832/752/490/164/10

844/801/752/529/192/13

Derisi

Train

1608/1590/1456/969/300/11

1608/1535/1459/1052/366/16

Test

1275/1266/1153/761/243/8

1275/1216/1151/812/274/15

Valid

842/831/751/489/164/10

842/800/752/531/193/13

Expr

Train

1639/1621/1481/979/303/11

1639/1563/1483/1062/372/16

Test

1291/1282/1173/767/245/8

1291/1231/1168/817/275/16

Valid

849/837/757/493/164/10

849/805/756/533/192/13

Eisen

Train

1058/1054/997/667/210/8

1058/1019/987/714/251/11

Test

837/834/784/517/161/4

837/803/774/543/173/9

Valid

529/525/493/323/104/7

529/510/489/340/117/7

Gasch1

Train

1634/1616/1477/977/303/11

1634/1558/1479/1060/372/16

Test

1284/1275/1167/764/243/8

1284/1226/1163/814/273/16

Valid

846/834/754/491/164/10

846/803/754/531/192/13

Gasch2

Train

1639/1621/1481/979/303/11

1639/1563/1483/1062/372/16

Test

1291/1282/1173/767/245/8

1291/1231/1168/817/275/16

Valid

849/837/757/493/164/10

849/805/756/533/192/13

Hom

Train

1669/1607/1470/979/302/11

1669/1548/1470/1059/372/16

Test

1315/1275/1167/766/245/8

1315/1226/1163/817/275/16

Valid

870/833/753/492/164/10

870/802/753/532/193/13

Pheno

Train

656/649/593/403/133/6

656/625/590/438/158/8

Test

582/578/524/348/108/3

582/556/525/372/121/8

Valid

353/349/316/204/69/6

353/338/311/223/84/5

Spo

Train

1600/1582/1448/963/299/11

1600/1527/1451/1043/365/16

Test

1266/1257/1146/758/243/8

1266/1208/1144/808/272/15

Valid

837/826/747/486/163/10

837/795/747/526/191/13

Seq

Train

1701/1639/1499/990/305/11

1701/1578/1497/1072/376/16

Test

1339/1298/1188/774/248/8

1339/1246/1182/825/278/16

Valid

879/842/762/497/164/10

879/810/761/538/194/13

Struc

Train

1665/1634/1495/988/304/11

1665/1575/1494/1071/375/16

Test

1313/1292/1182/770/245/8

1313/1241/1177/821/275/16

Valid

860/840/760/495/162/10

860/808/759/536/192/13

Mean

Train

1510/1486/1361/903/280/10

1510/1433/1361/979/343/14

Test

1196/1181/1082/710/226/7

1196/1135/1077/756/253/14

Valid

783/768/696/453/150/9

783/740/695/490/177/11