Skip to main content

Table 3 Prediction results of the top 50 inflammatory bowel disease-associated microbes

From: WMGHMDA: a novel weighted meta-graph-based model for predicting human microbe-disease association on heterogeneous information network

Microbe Evidence Microbe Evidence
Bacteroidetes PMID:25307765 Clostridium Azimirad et al.,2012
Firmicutes PMID:25307765 Bacteroides ovatus PMID:29454108
Prevotella PMID: 25307765 Betaproteobacteria Unconfirmed
Clostridium difficile Azimirad et al.,2012 Clostridiales PMID:29965986
Helicobacter pylori PMID:22221289 Klebsiella PMID:29573336
Clostridium coccoides PMID:19235886 Bifidobacterium PMID:24478468
Staphylococcus Azimirad et al.,2012 Gammaproteobacteria PMID:29385143
Lactobacillus PMID:26340825 Porphyromonadaceae PMID:29573237
Haemophilus PMID:24013298 Collinsella aerofaciens PMID:26848182
Enterobacteriaceae PMID:24629344 Propionibacterium PMID:26640113
Staphylococcus Azimirad et al.,2012 Propionibacterium acnes PMID:26640113
Veillonella PMID:28842640 Alistipes PMID:28877044
Bacteroides PMID:25307765 Parabacteroides PMID:25307765
Clostridia PMID:25307765 Prevotellaceae PMID:29514953
Bacteroides vulgatus PMID:29454108 Veillonellaceae PMID: 28842640
Bacteroides uniformis PMID:26789999 Fusobacteriaceae PMID:24629344
Bacteroidaceae PMID:17897884 Shigella PMID:29485143
Faecalibacterium prausnitzii PMID:24799893 Enterobacter aerogenes Unconfirmed
Streptococcus PMID:23679203 Enterobacter hormaechei Unconfirmed
Clostridium leptum PMID:28099495 Klebsiella pneumoniae PMID:29573336
Enterococcus PMID:24629344 Coxiellaceae Unconfirmed
Escherichia coli PMID:29573336 Bacteroidales PMID:24629344
Stenotrophomonas maltophilia Uncofirmed Enterococcus faecium PMID:29135456
Fusobacterium PMID:25307765 Erysipelotrichales PMID:29965986
Burkholderia PMID:24325678 Bacilli PMID:29049404
  1. The first column records top 1-25 associated microbes. The third column records top 26-50 associated microbes