Table 3 Prediction results of the top 50 inflammatory bowel disease-associated microbes
Microbe | Evidence | Microbe | Evidence |
|---|---|---|---|
Bacteroidetes | PMID:25307765 | Clostridium | Azimirad et al.,2012 |
Firmicutes | PMID:25307765 | Bacteroides ovatus | PMID:29454108 |
Prevotella | PMID: 25307765 | Betaproteobacteria | Unconfirmed |
Clostridium difficile | Azimirad et al.,2012 | Clostridiales | PMID:29965986 |
Helicobacter pylori | PMID:22221289 | Klebsiella | PMID:29573336 |
Clostridium coccoides | PMID:19235886 | Bifidobacterium | PMID:24478468 |
Staphylococcus | Azimirad et al.,2012 | Gammaproteobacteria | PMID:29385143 |
Lactobacillus | PMID:26340825 | Porphyromonadaceae | PMID:29573237 |
Haemophilus | PMID:24013298 | Collinsella aerofaciens | PMID:26848182 |
Enterobacteriaceae | PMID:24629344 | Propionibacterium | PMID:26640113 |
Staphylococcus | Azimirad et al.,2012 | Propionibacterium acnes | PMID:26640113 |
Veillonella | PMID:28842640 | Alistipes | PMID:28877044 |
Bacteroides | PMID:25307765 | Parabacteroides | PMID:25307765 |
Clostridia | PMID:25307765 | Prevotellaceae | PMID:29514953 |
Bacteroides vulgatus | PMID:29454108 | Veillonellaceae | PMID: 28842640 |
Bacteroides uniformis | PMID:26789999 | Fusobacteriaceae | PMID:24629344 |
Bacteroidaceae | PMID:17897884 | Shigella | PMID:29485143 |
Faecalibacterium prausnitzii | PMID:24799893 | Enterobacter aerogenes | Unconfirmed |
Streptococcus | PMID:23679203 | Enterobacter hormaechei | Unconfirmed |
Clostridium leptum | PMID:28099495 | Klebsiella pneumoniae | PMID:29573336 |
Enterococcus | PMID:24629344 | Coxiellaceae | Unconfirmed |
Escherichia coli | PMID:29573336 | Bacteroidales | PMID:24629344 |
Stenotrophomonas maltophilia | Uncofirmed | Enterococcus faecium | PMID:29135456 |
Fusobacterium | PMID:25307765 | Erysipelotrichales | PMID:29965986 |
Burkholderia | PMID:24325678 | Bacilli | PMID:29049404 |