DE (%) | Up (%) | edgeR - robust | DESeq2 | limma - voom | ELMSeq | rSeqRobust |
---|---|---|---|---|---|---|
1 | 50 | 0.9349 | 0.9442 | 0.9087 | 0.9243 | 0.9277 |
(0.0222) | (0.0134) | (0.0265) | (0.0154) | (0.0156) | ||
1 | 75 | 0.9349 | 0.9423 | 0.9436 | 0.9359 | 0.9315 |
(0.0153) | (0.0125) | (0.0144) | (0.015) | (0.0147) | ||
1 | 100 | 0.907 | 0.8781 | 0.9235 | 0.8498 | 0.8481 |
(0.0391) | (0.0456) | (0.0398) | (0.0579) | (0.0596) | ||
10 | 50 | 0.8743 | 0.8772 | 0.8687 | 0.8604 | 0.864 |
(0.0177) | (0.0171) | (0.0211) | (0.0194) | (0.0192) | ||
10 | 75 | 0.9043 | 0.8916 | 0.9275 | 0.8751 | 0.8729 |
(0.0256) | (0.0276) | (0.0226) | (0.0329) | (0.0373) | ||
10 | 100 | 0.9217 | 0.8959 | 0.9174 | 0.9194 | 0.9217 |
(0.0185) | (0.0191) | (0.0233) | (0.0201) | (0.0205) | ||
30 | 50 | 0.9154 | 0.9111 | 0.9196 | 0.8874 | 0.8937 |
(0.0141) | (0.0177) | (0.0153) | (0.023) | (0.0224) | ||
30 | 75 | 0.9021 | 0.8762 | 0.8942 | 0.8777 | 0.8862 |
(0.0324) | (0.0395) | (0.0407) | (0.0458) | (0.0509) | ||
30 | 100 | 0.8599 | 0.8431 | 0.8658 | 0.8391 | 0.8964 |
(0.0201) | (0.0175) | (0.022) | (0.0265) | (0.0149) | ||
50 | 50 | 0.9018 | 0.9178 | 0.9035 | 0.8978 | 0.8914 |
(0.0187) | (0.0132) | (0.0162) | (0.0162) | (0.0252) | ||
50 | 75 | 0.8704 | 0.8681 | 0.8724 | 0.8719 | 0.9066 |
(0.02) | (0.021) | (0.0182) | (0.027) | (0.0215) | ||
50 | 100 | 0.7227 | 0.759 | 0.7251 | 0.8133 | 0.8809 |
(0.0331) | (0.0278) | (0.0291) | (0.036) | (0.0268) | ||
70 | 50 | 0.8804 | 0.905 | 0.8641 | 0.9004 | 0.8885 |
(0.0247) | (0.0238) | (0.0348) | (0.0258) | (0.0301) | ||
70 | 75 | 0.8073 | 0.8202 | 0.8088 | 0.8761 | 0.8747 |
(0.0275) | (0.0285) | (0.0241) | (0.0277) | (0.0227) | ||
70 | 100 | 0.4748 | 0.5097 | 0.4891 | 0.4778 | 0.9059 |
(0.0507) | (0.0415) | (0.0601) | (0.0614) | (0.0165) | ||
90 | 50 | 0.8905 | 0.9316 | 0.8625 | 0.9094 | 0.8581 |
(0.0299) | (0.0113) | (0.0322) | (0.0116) | (0.0433) | ||
90 | 75 | 0.6897 | 0.6534 | 0.7015 | 0.6706 | 0.7144 |
(0.0485) | (0.0438) | (0.045) | (0.0379) | (0.0721) | ||
90 | 100 | 0.2229 | 0.4989 | 0.2818 | 0.3102 | 0.411 |
(0.04) | (0.0297) | (0.0365) | (0.041) | (0.0916) |