DE (%) | Up (%) | edgeR - robust | DESeq2 | limma - voom | ELMSeq | rSeqRobust |
---|---|---|---|---|---|---|
1 | 50 | 0.9727 | 0.9861 | 0.9906 | 0.9864 | 0.9863 |
(0.0077) | (0.0066) | (0.0051) | (0.0061) | (0.0063) | ||
1 | 75 | 0.9951 | 0.9994 | 0.9991 | 0.9986 | 0.9991 |
(0.0032) | (4e-04) | (9e-04) | (9e-04) | (8e-04) | ||
1 | 100 | 0.9774 | 0.9892 | 0.9939 | 0.9811 | 0.9845 |
(0.0089) | (0.0068) | (0.0026) | (0.0093) | (0.0135) | ||
10 | 50 | 0.9807 | 0.9889 | 0.989 | 0.983 | 0.9847 |
(0.0038) | (0.0016) | (0.0021) | (0.0026) | (0.0025) | ||
10 | 75 | 0.9803 | 0.9856 | 0.9889 | 0.987 | 0.9895 |
(0.0037) | (0.0027) | (0.0019) | (0.0023) | (0.0028) | ||
10 | 100 | 0.9601 | 0.9568 | 0.979 | 0.9784 | 0.9763 |
(0.0072) | (0.007) | (0.0038) | (0.0052) | (0.0073) | ||
30 | 50 | 0.9811 | 0.9886 | 0.9878 | 0.9854 | 0.9864 |
(0.002) | (8e-04) | (0.002) | (9e-04) | (0.001) | ||
30 | 75 | 0.9321 | 0.946 | 0.9576 | 0.9836 | 0.9856 |
(0.005) | (0.0036) | (0.0031) | (0.0026) | (0.0026) | ||
30 | 100 | 0.8313 | 0.7859 | 0.8892 | 0.9725 | 0.9809 |
(0.0217) | (0.0072) | (0.0171) | (0.0036) | (0.0028) | ||
50 | 50 | 0.9836 | 0.9904 | 0.9856 | 0.9889 | 0.9893 |
(0.002) | (0.0016) | (0.0013) | (0.0013) | (0.0013) | ||
50 | 75 | 0.8518 | 0.8061 | 0.8857 | 0.9787 | 0.987 |
(0.0218) | (0.011) | (0.0167) | (0.0024) | (0.002) | ||
50 | 100 | 0.5708 | 0.5533 | 0.5863 | 0.896 | 0.9827 |
(0.0356) | (0.0086) | (0.0223) | (0.0078) | (0.0029) | ||
70 | 50 | 0.9763 | 0.9875 | 0.97 | 0.986 | 0.9871 |
(0.0034) | (0.0013) | (0.0085) | (0.0022) | (0.0019) | ||
70 | 75 | 0.7051 | 0.5986 | 0.7466 | 0.885 | 0.9826 |
(0.0226) | (0.0139) | (0.0311) | (0.0109) | (0.003) | ||
70 | 100 | 0.3702 | 0.5275 | 0.3727 | 0.3825 | 0.9864 |
(0.0052) | (0.0097) | (0.013) | (0.0018) | (0.0028) | ||
90 | 50 | 0.9792 | 0.9851 | 0.9766 | 0.9878 | 0.9894 |
(0.0034) | (0.0027) | (0.0035) | (0.0019) | (0.0016) | ||
90 | 75 | 0.4242 | 0.5324 | 0.4887 | 0.4061 | 0.9869 |
(0.0163) | (0.0135) | (0.0205) | (0.0049) | (0.0018) | ||
90 | 100 | 0.3881 | 0.5456 | 0.3553 | 0.3833 | 0.9841 |
(0.003) | (0.0119) | (0.0027) | (0.0026) | (0.0018) |