Skip to main content

Table 8 The computational times (in seconds) of edgeR-robust, DESeq2, limma-voom, ELMSeq and rSeqRobust

From: Joint between-sample normalization and differential expression detection through 0-regularized regression

nedgeRDESeq2voomELMSeqrSeqRobust
75.450.760.13403.3916.63
209.491.510.16987.8721.84
20070.6849.300.542225.9576.93
  1. Percent of DE genes: 10%, percent of up-regulated genes among the DE genes: 50%. The least time is shown in bold