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Table 1 Heterogeneous meta-properties of 28 time-series gene expression dataset for cold stress treatment

From: HTRgene: a computational method to perform the integrated analysis of multiple heterogeneous time-series data: case analysis of cold and heat stress response signaling genes in Arabidopsis

No.Sample IDEco-typeGeno-type (NT: non-transgenic)Age (days)TissueTemperature (C)Time points (minutes (m) or hours (h) after treatment)
1E-MTAB-375ColumbiaNT14rosette leaf (low light)40h, 5m, 10m, 20m, 40m, 1h, 80m, 100m, 2h, 140m, 160m, 3h, 200m, 220m, 4h, 260m, 280m, 5h, 320m, 340m, 6h, 10h40m, 21h20m
2E-MTAB-375ColumbiaNT14rosette leaf (dark)40h, 5m, 10m, 20m, 40m, 1h, 80m, 100m, 2h, 140m, 160m, 3h, 200m, 220m, 4h, 260m, 280m, 5h, 320m, 340m, 6h, 10h40m, 21h20m
3GSE5621ColumbiaNT14shoot40h, 30m, 1h, 3h, 6h, 12h, 24h
4GSE5621ColumbiaNT14root40h, 30m, 1h, 3h, 6h, 12h, 24h
5GSE3326ColumbiaNT14seedlings00h, 3h, 6h, 24h
6GSE3326Columbiaice11seedlings00h, 3h, 6h, 24h
7GSE55835ColumbiaNT42leaves-30h, 8h, 24h, 72h
8GSE55835RschewNT42leaves-30h, 8h, 24h, 72h
9GSE55835TenelaNT42leaves-30h, 8h, 24h, 72h
10GSE5534ColumbiaNT10seedlings (plate)40h, 1h, 24h, 168h
11GSE5535ColumbiaNT10seedlings (soil)40h, 1h, 24h, 168h
12GSE53990ColumbiaNT289-11th adult leaves40h, 48h, 120h
13GSE53990Columbiarcf289-11th adult leaves40h, 48h, 120h
14GSE39090ColumbiaNT14seedlings40h, 12h, 24h
15GSE39090Columbiarcf14seedlings40h, 12h, 24h
16GSE37130C24NT20seedlings40h, 3h, 24h
17GSE37130ColumbiaNT20seedlings40h, 24h
18GSE43818ColumbiaNT21entire aerial part40h, 24h
19GSE43818Columbiacamta1/2/321entire aerial part40h, 24h
20GSE55906WS-2NT11entire aerial part40h, 24h
21GSE55906WS-3CBF2DN11entire aerial part40h, 24h
22GSE55907ColumbiaNT12seedlings40h, 24h
23GSE64575ColumbiaNT10entire aerial part40h, 24h
24E-MEXP-1345ColumbiaNT45leaf tip40h, 24h
25GSE19254ColumbiaNT38aerial tissues40h, 48h
26GSE19254Columbiasfr338aerial tissues40h, 48h
27E-MEXP-3714ColumbiaNT11aerial tissues10h, 2h
28E-MEXP-3714Columbiaahk2ahk311aerial tissues10h, 2h