Table 1 Heterogeneous meta-properties of 28 time-series gene expression dataset for cold stress treatment
No. | Sample ID | Eco-type | Geno-type (NT: non-transgenic) | Age (days) | Tissue | Temperature (∘C) | Time points (minutes (m) or hours (h) after treatment) |
|---|---|---|---|---|---|---|---|
1 | E-MTAB-375 | Columbia | NT | 14 | rosette leaf (low light) | 4 | 0h, 5m, 10m, 20m, 40m, 1h, 80m, 100m, 2h, 140m, 160m, 3h, 200m, 220m, 4h, 260m, 280m, 5h, 320m, 340m, 6h, 10h40m, 21h20m |
2 | E-MTAB-375 | Columbia | NT | 14 | rosette leaf (dark) | 4 | 0h, 5m, 10m, 20m, 40m, 1h, 80m, 100m, 2h, 140m, 160m, 3h, 200m, 220m, 4h, 260m, 280m, 5h, 320m, 340m, 6h, 10h40m, 21h20m |
3 | GSE5621 | Columbia | NT | 14 | shoot | 4 | 0h, 30m, 1h, 3h, 6h, 12h, 24h |
4 | GSE5621 | Columbia | NT | 14 | root | 4 | 0h, 30m, 1h, 3h, 6h, 12h, 24h |
5 | GSE3326 | Columbia | NT | 14 | seedlings | 0 | 0h, 3h, 6h, 24h |
6 | GSE3326 | Columbia | ice1 | 1 | seedlings | 0 | 0h, 3h, 6h, 24h |
7 | GSE55835 | Columbia | NT | 42 | leaves | -3 | 0h, 8h, 24h, 72h |
8 | GSE55835 | Rschew | NT | 42 | leaves | -3 | 0h, 8h, 24h, 72h |
9 | GSE55835 | Tenela | NT | 42 | leaves | -3 | 0h, 8h, 24h, 72h |
10 | GSE5534 | Columbia | NT | 10 | seedlings (plate) | 4 | 0h, 1h, 24h, 168h |
11 | GSE5535 | Columbia | NT | 10 | seedlings (soil) | 4 | 0h, 1h, 24h, 168h |
12 | GSE53990 | Columbia | NT | 28 | 9-11th adult leaves | 4 | 0h, 48h, 120h |
13 | GSE53990 | Columbia | rcf | 28 | 9-11th adult leaves | 4 | 0h, 48h, 120h |
14 | GSE39090 | Columbia | NT | 14 | seedlings | 4 | 0h, 12h, 24h |
15 | GSE39090 | Columbia | rcf | 14 | seedlings | 4 | 0h, 12h, 24h |
16 | GSE37130 | C24 | NT | 20 | seedlings | 4 | 0h, 3h, 24h |
17 | GSE37130 | Columbia | NT | 20 | seedlings | 4 | 0h, 24h |
18 | GSE43818 | Columbia | NT | 21 | entire aerial part | 4 | 0h, 24h |
19 | GSE43818 | Columbia | camta1/2/3 | 21 | entire aerial part | 4 | 0h, 24h |
20 | GSE55906 | WS-2 | NT | 11 | entire aerial part | 4 | 0h, 24h |
21 | GSE55906 | WS-3 | CBF2DN | 11 | entire aerial part | 4 | 0h, 24h |
22 | GSE55907 | Columbia | NT | 12 | seedlings | 4 | 0h, 24h |
23 | GSE64575 | Columbia | NT | 10 | entire aerial part | 4 | 0h, 24h |
24 | E-MEXP-1345 | Columbia | NT | 45 | leaf tip | 4 | 0h, 24h |
25 | GSE19254 | Columbia | NT | 38 | aerial tissues | 4 | 0h, 48h |
26 | GSE19254 | Columbia | sfr3 | 38 | aerial tissues | 4 | 0h, 48h |
27 | E-MEXP-3714 | Columbia | NT | 11 | aerial tissues | 1 | 0h, 2h |
28 | E-MEXP-3714 | Columbia | ahk2ahk3 | 11 | aerial tissues | 1 | 0h, 2h |