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Table 3 Antibiotic resistance genes present in pre-transplant E. coli genome

From: Intestinal microbiota domination under extreme selective pressures characterized by metagenomic read cloud sequencing and assembly

CategoryResistance Gene(s)
Beta-lactam resistanceCTX-M-27
Aminoglycoside resistancekdpE
Polymyxin resistancearnA, pmrC, pmrE, pmrF
Bacitracin resistancebacA
Efflux pump complex or subunitacrA, acrB, acrD, acrE, acrF, emrA, emrB, emrD, emrE, emrK, emrY, marA, mdfA, mdtA, mdtC, mdtE, mdtF, mdtG, mdtH, mdtM, mdtN, mdtO, mdtP, msbA, msrB, patA, TolC, YojI
Protein modulating antibiotic effluxacrS, baeR, baeS, cpxA, CRP, emrR, evgA, evgS, gadW, gadX, H-NS