Fig. 6
From: Exploring the 2D and 3D structural properties of topologically associating domains
a and e show the Pearson’s correlations between the target and inferred Euclidean distances between any two beads with non-zero Hi-C contacts; b and f show the plots of root-mean-square errors (RMSEs) between wish and inferred Euclidean distances between any two beads with non-zero Hi-C contacts; c and g show the Spearman’s correlations between inferred Euclidean distances and non-zero Hi-C contact counts, whereas d and h show the same correlations as in c and g but with all Hi-C contacts. Eq. 4.1 denotes Eq. 4 with R equal to the maximum distance; Eq. 4.2 stands for Eq. 4 with R equal to the shortest path