Table 1 Characteristics of the input dataset
From: GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data
Dataset | Read Set | Target Set | ||||
|---|---|---|---|---|---|---|
avg. len. | max. len. | No. of seq. | avg. len. | max. len. | No. of seq. | |
DS100 | 100 | 100 | 10e6 | 162 | 177 | 10e6 |
DS150 | 150 | 150 | 10e6 | 260 | 277 | 10e6 |
DS300 | 300 | 300 | 10e6 | 538 | 571 | 10e6 |