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Table 2 Alignment kernel times (in seconds) for NVBIO and GASAL2

From: GASAL2: a GPU accelerated sequence alignment library for high-throughput NGS data

  DS100 DS150 DS300
GPU kernel NVBIO GASAL2 NVBIO GASAL2 NVBIO GASAL2
Local (only score) 1 1 2.2 2.2 8.4 9.6
Local with start 2 1.9 4.4 3.3 16.8 13.6
Local with traceback 6 1.58 14 3.6 57.8 15.5
Semi-global (only score) 0.9 1 2 2.2 8 9.3
Semi-global with start 1.8 1.8 4 3.9 16 16
Semi-global with traceback 6 1.43 14 3.4 62 15
Global (only score) 0.9 1 2 2.3 8 9.5
Global with traceback 6 1.4 14 3.5 63 15