Table 1 The description of benchmark dataset
From: DDIGIP: predicting drug-drug interactions based on Gaussian interaction profile kernels
Data type | Data | Database | dimensionality |
|---|---|---|---|
chemical | Chemical substructures | PubChem | 881 |
Biological | Drug-targets | DrugBank | 780 |
| Â | Drug transporters | DrugBank | 18 |
| Â | Drug enzymes | DrugBank | 129 |
| Â | Drug pathways | KEGG | 253 |
Phenotypic | Drug indications | SIDER | 4897 |
| Â | Drug side effects | SIDER | 4897 |
| Â | Drug off side effects | OFFSIDES | 9496 |
Interaction | Drug-drug interactions | TWOSIDES | Drugs:548,DDIs:48,584 |