Skip to main content

Table 2 Information on the edge attributes used in a gengraph genome graph

From: GenGraph: a python module for the simple generation and manipulation of genome graphs

Edge attribute Type Description
name String Edges are named by a combination of the two nodes that they link. Eg: Aln_48_50 (-) Aln_48_49 would be the name of the node that links nodes Aln_48_50 and Aln_48_49
ids String This is a comma separated list of the isolates that are represented by this edge.