Table 3 An increase in file size was observed per genome added to the graph that demonstrated the compression of data that occurs by collapsing regions of shared aligned sequences into single representative nodes
From: GenGraph: a python module for the simple generation and manipulation of genome graphs
Number of genomes | 1 | 2 | 3 | 4 | 5 | 6 | 10 |
|---|---|---|---|---|---|---|---|
File size | 4,5Mb | 5,9Mb | 7,6Mb | 8,5Mb | 11Mb | 13Mb | 38Mb |
Number of nodes | 0 | 3,690 | 8,106 | 9,320 | 13,264 | 15,355 | 43,290 |
Number of edges | 0 | 4,886 | 10,868 | 12,485 | 17,823 | 22,296 | 73,652 |