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Table 5 Performance comparison of dimensionality reduction methods on GBM dataset

From: A hierarchical integration deep flexible neural forest framework for cancer subtype classification by integrating multi-omics data

Data

PCA

NMF

SAE

DNA methylation

0.558

0.577

0.596

miRNA expression

0.519

0.500

0.539

Gene expression

0.808

0.781

0.865

Integrative Data

0.827

0.808

0.885