Table 6 Comparison to existing software

A-Lister

yes

yes

AND, FAND, OR, DIFF

DE data, lists

Command Line and Graphical User Interface

Functional Heatmap [13]

yes

no

AND (implicit)

DE timeseries data

Web App

Galaxy (Text Manipulation) [14]

yes

no

AND, OR, DIFF

Tabular data

Web App

Intervene [15]

no

no

AND

Genomic regions, binary, counts, lists

Command Line, Web App

VennPainter [16]

no

no

AND

Lists

Graphical User Interface

InteractiVenn [17]

no

no

AND

Lists

Web App

SuperExactTest [18]

no

no

AND, OR

Lists

R

Gene-Overlap [19]

no

no

AND, OR

Lists

R