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Fig. 1 | BMC Bioinformatics

Fig. 1

From: The impact of various seed, accessibility and interaction constraints on sRNA target prediction- a systematic assessment

Fig. 1

Seed length and GU base pairs. (left) Relative number of recovered verified targets among the top-100 predictions of each sRNA for different seed lengths (seedBP) with and without GU base pairs, i.e. blue = [seed] and green = [seedNoGU], resp., where red = [no seed] refers to results without seed constraints. (right) Relative overall runtime to process each parameter set. The dotted gray lines mark respective values of IntaRNA with default parameters

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BMC Bioinformatics

ISSN: 1471-2105

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