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Fig. 5 | BMC Bioinformatics

Fig. 5

From: A comparative study of topology-based pathway enrichment analysis methods

Fig. 5

Average ranking of empirical powers using sample labels from the original study (a) and shuffled sample labels (b) for the metabolomics data [39]. The x-axis shows the pathway size, and the y-axis indicates the average ranking of empirical power over different mean changes. Lower ranking indicates better performance. Overlapping points were re-positioned by adding ± 1 to the x-axis and ± 0.1 to the y-axis. DEGraph and NetGSA perform the best regardless of sample permutation

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