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Table 1 Statistics of TnSeq datasets

From: Statistical analysis of variability in TnSeq data across conditions using zero-inflated negative binomial regression

Dataset

Condition

Mapped reads

Densitya

NZmeanb

A1

in vitro

989413

0.55

23.9

A2

in vitro

1376613

0.58

31.9

A3

in vitro

1531598

0.58

35.3

A4

in vitro

547902

0.47

15.5

A5

in vitro

1450383

0.57

33.9

A6

in vitro

475126

0.55

11.6

B1

in vivo

1500646

0.47

42.5

B2

in vivo

601683

0.45

17.7

B3

in vivo

1245065

0.51

32.5

B4

in vivo

1472365

0.49

39.9

B5

in vivo

909394

0.42

29.3

B6

in vivo

409018

0.34

16.2

  1. aFraction of TA sites with insertions
  2. bMean count at TA sites with insertions before normalization
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BMC Bioinformatics

ISSN: 1471-2105

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