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Table 2 Comparison of ZINB regression with and without saturation adjustment, for artificially-depleted samples

From: Statistical analysis of variability in TnSeq data across conditions using zero-inflated negative binomial regression

Scenario

Datasets compared

Resampling

ZINB (SA +)

ZINB (SA −)

1

(A1,A2) vs (B1,B2)

64

73

162

2

(A1,A2) vs (B1[50%],B2[50%])

108

121

2668

3

(A1[50%],A2[50%]) vs (B1,B2)

17

112

1139

4

(A1[50%],A2[50%]) vs (B1[50%],B2[50%])

8

30

37