Table 2 Accuracy of PPR-SSM compared with a baseline and PPR model, on the ChEBI-patents, HPO-GSC, and CRAFT (Biological Process and Cellular Component) gold standards
From: PPR-SSM: personalized PageRank and semantic similarity measures for entity linking
Method | ChEBI-patents | HPO-GSC | CRAFT-BP | CRAFT-CC |
|---|---|---|---|---|
Top match | 0.5271 | 0.6380 | 0.7744 | 0.6899 |
PPR | 0.6654 | 0.5544 | 0.6923 | 0.6166 |
PPR-IC | 0.8026 | 0.6557 | 0.8204 | 0.7247 |
PPR-SSM | 0.8039 | 0.6825 | 0.8244 | 0.7258 |