Table 1 Summary statistics for the whole genome sequencing of data
From: Optimal sequencing depth design for whole genome re-sequencing in pigs
Sample | Depth | Coverage | Map Ratio | Breed | Sex | SRA project |
|---|---|---|---|---|---|---|
S403505 | 24.40 | 99.41% | 99.30% | Yorkshire | male | Â |
S474607 | 22.31 | 99.39% | 99.53% | Yorkshire | male | Â |
S494203 | 21.79 | 99.32% | 98.76% | Yorkshire | male | Â |
SAMN05791661 | 22.65 | 99.44% | 99.50% | Duroc | male | PRJNA343658 |
SAMN05791665 | 21.72 | 99.46% | 99.57% | Duroc | male | PRJNA343658 |
SAMN05791663 | 23.90 | 99.57% | 99.50% | Duroc | male | PRJNA343658 |
SAMN05791650 | 19.89 | 99.30% | 99.47% | Landrace | male | PRJNA343658 |
SAMN05791651 | 22.56 | 99.39% | 99.57% | Landrace | male | PRJNA343658 |
SAMN05791660 | 19.36 | 99.38% | 99.73% | Landrace | male | PRJNA343658 |