Table 1 Mean peptide size according to the requested peptide length
From: Benchmarking the PEPOP methods for mimicking discontinuous epitopes
mean | L = 8 | L = 10 | L = 12 | L = 14 | L = 16 |
|---|---|---|---|---|---|
of the means | 11.66 | 13.35 | 14.95 | 16.45 | 17.70 |
standard deviation | 2.16 | 2.34 | 2.66 | 3.02 | 3.29 |
Prime methods | 10.44 | 11.97 | 13.53 | 15.14 | 16.65 |
ALA methods | 14.98 | 17.24 | 19.06 | 20.36 | 21.05 |
SA methods | 11.45 | 13.13 | 14.77 | 16.44 | 17.88 |
SAS methods | 12.96 | 14.87 | 16.72 | 18.47 | 19.80 |
Prime and Linker methods | 12.48 | 14.33 | 16.05 | 17.62 | 18.84 |
Graph-based methods | 10.16 | 11.55 | 12.96 | 14.31 | 15.59 |
SHP based methods | 13.27 | 13.27 | 13.27 | 13.27 | 13.27 |
TSP based methods | 9.13 | 10.98 | 12.85 | 14.66 | 16.37 |
TSPaa method | 8.00 | 9.99 | 11.99 | 13.98 | 15.97 |
TSPnat and TSPrev methods | 9.27 | 11.10 | 12.96 | 14.75 | 16 |