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Fig. 1 | BMC Bioinformatics

Fig. 1

From: An efficient exact algorithm for computing all pairwise distances between reconciliations in the duplication-transfer-loss model

Fig. 1

DTL reconciliation. a An instance of the DTL reconciliation problem comprising a species tree (black), a gene tree (gray), and a leaf mapping. Duplication, transfer and loss costs are 1, 4, and 1, respectively. b and c Two different MPRs, each with total cost 4. d The associated reconciliation graph. Mapping nodes are indicated with double line borders. Event nodes are designated with \(\mathbb {S}\) (speciation event), \(\mathbb {D}\) (duplication event), \(\mathbb {T}\) (transfer event), or \(\mathbb {L}\) (loss event). The reconciliation traversal indicated by solid edges corresponds to the MPR in (b) and the reconciliation traversal indicated by dashed edges corresponds to the MPR in (c); bold edges indicate shared elements of the two MPRs. Figure adapted from Haack et. al [11] with permission

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