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Fig. 1 | BMC Bioinformatics

Fig. 1

From: Recovering rearranged cancer chromosomes from karyotype graphs

Fig. 1

Rearranged genomes and Interval Adjacency Graphs. a Reference and derived genomes R and Q both depicted as sequences of oriented segments and a weighted Interval Adjacency Graph determined by a derived genome Q. In the IAG segment edges are shown as solid, with colors corresponding to distinct chromosomes, and adjacency edges are shown as dashed, with reference adjacencies shown in black, and novel adjacencies depicted in red. Edges with copy number 0 are shown as faded, copy numbers of 1 are omitted for clarity. b Rearranged linear chromosomes in the mutated genome Q depicted as both sequences of oriented segments and as segment/adjacency edge-alternating paths in the IAG’s connected components

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