Fig. 2
From: MADOKA: an ultra-fast approach for large-scale protein structure similarity searching
Two examples showing the structural alignments from TM-align and MADOKA. a shows alignment between 1A1O_A (276 residues) and 4HKJ_A (277 residues). b shows alignment between 2GZA_A (334 residues) and 1A1M_B (99 residues)
