Fig. 1

Example outputs of MIRIA. a Percentages of all 12 RNA editing types in Alu regions, repetitive non-Alu regions and non-repetitive regions. b Overview annotation table for a tissue. c Visualization interface showing all RNA editing sites within a gene. d Percentages of different genomic features across tissues in a species. e The overall RNA editing level across tissues in a species. f A Circos graph comparing the difference in the RNA editing numbers between different tissues at the genome-wide level. g Pearson correlations for the RNA editing levels of editing sites between various tissues in a species. h Heatmap showing the RNA editing levels of the top 200 conserved sites for human and other mammalian tissues. The hierarchical clustering dendrogram of tissues based on the correlations of the editing levels between tissues was appended at the top of the heatmap