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Table 1 The format of a single RNA editing file

From: MIRIA: a webserver for statistical, visual and meta-analysis of RNA editing data in mammals

Chromosome

Location (0 base)

Location (1 base)

Type

Supporting information

Strand

AD:DP

chr1

1,266,631

1,266,632

TC

3

–

5:9

chr1

1,280,297

1,280,298

AG

2

+

2:2

  1. Chromosome: Name of chromosome. Location (0/1 base): Position of the RNA editing site in the chromosome. Type: Type of the identified RNA editing site (e.g., AG means ‘A-to-G’, etc.). Supporting information: Number of supporting reads for this RNA editing site. Strand: Possible values are: ‘.’, ‘+’, and ‘-’, which corresponded to ‘uncertain’, ‘positive strand’, and ‘negative strand’, respectively. AD:DP: Number of reads that had this RNA editing site, and the number of reads that covered this location