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Table 1 The differences distinguish HKPocket database from the existing kinase-related databases

From: HKPocket: human kinase pocket database for drug design

Types of Database

Databases

Links

Kinase Protein

Experiment

Pocket Information

Sequences

Structures

Evolutionary trees

Molecules

Affinities

Phosphorylation sites

Mutation sites

catalytic

Non- catalytic

Human kinase protein databases

Kinase.com

http://www.kinase.com/

✓

 

✓

      

Protein Kinase Resource

http://www0.nih.go.jp/mirror/Kinases/pk_home.html

✓

✓

       

Target Informatics Platform (TIP)

http://www.eidogen.com/tcc.php

 

✓

       

KinG

http://king.mbu.iisc.ernet.in/

✓

        

Human kinase experiment databases

Kinase Validation Set

https://www.eidogen.com/kinasednld.php

   

✓

✓

    

KINOMEscan data

http://lincs.hms.harvard.edu/kinomescan/

   

✓

     

PhosphoBase

http://www.cbs.dtu.dk/databases/PhosphoBase/pbase2/

     

✓

   

KinMutBase

http://structure.bmc.lu.se/idbase/KinMutBase/

      

✓

  

Kinase Pathway Database

http://kinasedb.ontology.ims.u-tokyo.ac.jp/

✓

   

✓

    

Human kinase pocket databases

Kinase Knowledgebase (KKB)

http://www.eidogen.com/kinasekb.php

    

✓

  

✓

 

Kinase-Ligand Interaction Fingerprints and Structure database (KLIFS)

http://www.vu-compmedchem.nl/klifs

   

✓

✓

  

✓

 

HKPocket

http://zhaoserver.com.cn/HKPocket/HKPocket.html

✓

✓

✓

    

✓

✓