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Table 5 The performance comparison of several typical algorithms on four datasets

From: Detecting overlapping protein complexes in weighted PPI network based on overlay network chain in quotient space

Algorithms

DIP

Gavin

Krogan

MIPS

PC

Perfect

AS

PC

Perfect

AS

PC

Perfect

AS

PC

Perfect

AS

MCODE

49

1

16.73

66

8

9.12

76

11

7.21

63

3

8.33

MCL

189

0

3.76

217

20

6.83

550

17

4.63

922

12

4.67

CORE

1707

6

3.01

294

0

2.58

820

0

2.32

1745

0

2.18

ClusterONE

372

6

4.94

243

13

6.92

241

12

5.26

295

3

4.24

COACH

899

16

8.90

321

12

10.18

355

17

7.55

489

9

10.31

ONCQS

1640

103

2.67

525

49

3.98

759

80

2.86

1173

72

2.34