Membrane protein types | Index | PsePSSM | RPSSM | EDPSSM | KPSSM | CPSSM | CoPSSM | TriPSSM | Our model |
---|---|---|---|---|---|---|---|---|---|
 | Se | 0.9122 | 0.8761 | 0.8491 | 0.9054 | 0.8739 | 0.8806 | 0.9122 | 0.9144 |
Type I | Sp | 0.9776 | 0.9733 | 0.9622 | 0.9859 | 0.9666 | 0.9781 | 0.9884 | 0.9920 |
 | ACC | 0.9709 | 0.9633 | 0.9506 | 0.9776 | 0.9571 | 0.9682 | 0.9806 | 0.9841 |
 | MCC | 0.8505 | 0.8112 | 0.7546 | 0.8800 | 0.7856 | 0.8328 | 0.8953 | 0.9129 |
 | Se | 0.7308 | 0.6410 | 0.5256 | 0.6923 | 0.4231 | 0.6923 | 0.8205 | 0.8462 |
Type II | Sp | 0.9927 | 0.9918 | 0.9960 | 0.9913 | 0.9979 | 0.9922 | 0.9929 | 0.9944 |
 | ACC | 0.9880 | 0.9855 | 0.9875 | 0.9859 | 0.9875 | 0.9868 | 0.9898 | 0.9912 |
 | MCC | 0.6819 | 0.6067 | 0.6035 | 0.6339 | 0.5713 | 0.6489 | 0.7424 | 0.7748 |
 | Se | 0.1667 | 0.0 | 0.0 | 0.1667 | 0.0 | 0.0 | 0.1667 | 0.1667 |
Type III | Sp | 1.0 | 0.9998 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.9993 |
 | ACC | 0.9988 | 0.9984 | 0.9986 | 0.9988 | 0.9986 | 0.9986 | 0.9988 | 0.9984 |
 | MCC | 0.4080 | -0.0006 | 0.0 | 0.4080 | 0.0 | 0.0 | 0.4080 | 0.2032 |
 | Se | 0.4167 | 0.5000 | 0.4167 | 0.6667 | 0.0833 | 0.3333 | 0.6667 | 0.75 |
Type IV | Sp | 0.9995 | 0.9993 | 1.0 | 0.9995 | 1.0 | 0.9998 | 0.9995 | 0.9995 |
 | ACC | 0.9979 | 0.9979 | 0.9984 | 0.9986 | 0.9975 | 0.9979 | 0.9986 | 0.9982 |
 | MCC | 0.5446 | 0.5763 | 0.6450 | 0.7296 | 0.2883 | 0.5156 | 0.7296 | 0.7828 |
 | Se | 0.9275 | 0.9394 | 0.9219 | 0.9495 | 0.9305 | 0.9326 | 0.9553 | 0.9593 |
Mutipass | Sp | 0.9654 | 0.9438 | 0.8305 | 0.9625 | 0.9026 | 0.9682 | 0.9691 | 0.9785 |
 | ACC | 0.9444 | 0.9405 | 0.8994 | 0.9527 | 0.9236 | 0.9414 | 0.9587 | 0.9640 |
 | MCC | 0.8619 | 0.8493 | 0.7360 | 0.8799 | 0.8042 | 0.8560 | 0.8947 | 0.9083 |
 | Se | 0.3158 | 0.2368 | 0.2105 | 0.3684 | 0.2105 | 0.3684 | 0.3158 | 0.6053 |
Lipid-chain-anchored | Sp | 0.9986 | 0.9979 | 0.9977 | 0.9984 | 0.9991 | 0.9972 | 0.9970 | 0.9960 |
 | ACC | 0.9926 | 0.9912 | 0.9908 | 0.9928 | 0.9922 | 0.9917 | 0.9910 | 0.9926 |
 | MCC | 0.4557 | 0.3403 | 0.3018 | 0.4924 | 0.3719 | 0.4414 | 0.3850 | 0.5862 |
 | Se | 0.6522 | 0.5217 | 0.3913 | 0.6957 | 0.3913 | 0.7174 | 0.6957 | 0.8043 |
GPI-anchored | Sp | 0.9963 | 0.9986 | 0.9967 | 0.9986 | 0.9988 | 0.9951 | 0.9984 | 0.9963 |
 | ACC | 0.9926 | 0.9935 | 0.9903 | 0.9954 | 0.9924 | 0.9922 | 0.9952 | 0.9942 |
 | MCC | 0.6484 | 0.6431 | 0.4645 | 0.7631 | 0.5503 | 0.6582 | 0.7531 | 0.7465 |
 | Se | 0.9077 | 0.8536 | 0.6824 | 0.8784 | 0.8176 | 0.8851 | 0.8964 | 0.9009 |
Peripheral | Sp | 0.9537 | 0.9509 | 0.9481 | 0.9524 | 0.9403 | 0.9452 | 0.9578 | 0.9637 |
 | ACC | 0.9490 | 0.9409 | 0.9208 | 0.9448 | 0.9278 | 0.9391 | 0.9515 | 0.9573 |
 | MCC | 0.7655 | 0.7218 | 0.5959 | 0.7427 | 0.6678 | 0.7260 | 0.7711 | 0.7933 |