Membrane protein types | Index | PsePSSM | RPSSM | EDPSSM | KPSSM | CPSSM | CoPSSM | TPSSM | Our model |
---|---|---|---|---|---|---|---|---|---|
 | Se | 0.8571 | 0.7633 | 0.7265 | 0.7959 | 0.7633 | 0.7673 | 0.8653 | 0.8082 |
Type I | Sp | 0.9586 | 0.9574 | 0.9512 | 0.9705 | 0.9556 | 0.9550 | 0.9759 | 0.9845 |
 | ACC | 0.9517 | 0.9442 | 0.9359 | 0.9587 | 0.9426 | 0.9423 | 0.9684 | 0.9725 |
 | MCC | 0.6943 | 0.6290 | 0.5821 | 0.7048 | 0.6224 | 0.6229 | 0.7748 | 0.7853 |
 | Se | 0.4304 | 0.4051 | 0.3038 | 0.4810 | 0.2785 | 0.4304 | 0.4557 | 0.4684 |
Type II | Sp | 0.9887 | 0.9881 | 0.9904 | 0.9889 | 0.9952 | 0.0.9858 | 0.9906 | 0.9901 |
 | ACC | 0.9764 | 0.9753 | 0.9753 | 0.9778 | 0.9795 | 0.9736 | 0.9789 | 0.9786 |
 | MCC | 0.4327 | 0.4059 | 0.3423 | 0.4759 | 0.3873 | 0.4039 | 0.4769 | 0.4797 |
 | Se | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.1111 |
Type III | Sp | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.9958 |
 | ACC | 0.9975 | 0.9975 | 0.9975 | 0.9975 | 0.9975 | 0.9975 | 0.9975 | 0.9936 |
 | MCC | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0803 |
 | Se | 0.1765 | 0.1176 | 0.0588 | 0.3529 | 0.1176 | 0.2353 | 0.3529 | 0.3529 |
Type IV | Sp | 0.9994 | 0.9997 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.9980 |
 | ACC | 0.9956 | 0.9956 | 0.9956 | 0.9969 | 0.9958 | 0.9964 | 0.9969 | 0.9950 |
 | MCC | 0.3238 | 0.2788 | 0.2420 | 0.5932 | 0.3423 | 0.4842 | 0.5932 | 0.4011 |
 | Se | 0.9044 | 0.8971 | 0.8882 | 0.9350 | 0.9023 | 0.8910 | 0.9435 | 0.9443 |
Mutipass | Sp | 0.9494 | 0.9050 | 0.7655 | 0.9263 | 0.8712 | 0.9334 | 0.9316 | 0.9574 |
 | ACC | 0.9184 | 0.8996 | 0.8499 | 0.9323 | 0.8926 | 0.9043 | 0.9398 | 0.9484 |
 | MCC | 0.8232 | 0.7776 | 0.6517 | 0.8464 | 0.7572 | 0.7930 | 0.8627 | 0.8839 |
 | Se | 0.1111 | 0.0278 | 0.0833 | 0.0833 | 0.0278 | 0.0833 | 0.0833 | 0.6111 |
Lipid-chain-anchored | Sp | 0.9986 | 0.9997 | 0.9997 | 0.9986 | 0.9994 | 0.9992 | 0.9983 | 0.9927 |
 | ACC | 0.9897 | 0.9900 | 0.9906 | 0.9895 | 0.9897 | 0.9900 | 0.9892 | 0.9889 |
 | MCC | 0.2186 | 0.1161 | 0.2480 | 0.1731 | 0.0939 | 0.2012 | 0.1627 | 0.5238 |
 | Se | 0.4146 | 0.2927 | 0.2439 | 0.4146 | 0.2927 | 0.3902 | 0.4146 | 0.7073 |
GPI-anchored | Sp | 0.9961 | 0.9986 | 0.9983 | 0.9949 | 0.9992 | 0.9983 | 0.9992 | 0.9966 |
 | ACC | 0.9895 | 0.9906 | 0.9897 | 0.9914 | 0.9911 | 0.9881 | 0.9925 | 0.9933 |
 | MCC | 0.4717 | 0.4508 | 0.3864 | 0.5381 | 0.4807 | 0.4226 | 0.5907 | 0.7039 |
 | Se | 0.8884 | 0.8183 | 0.6581 | 0.8512 | 0.7883 | 0.8326 | 0.8741 | 0.8627 |
Peripheral | Sp | 0.9253 | 0.9050 | 0.9112 | 0.9312 | 0.9046 | 0.9064 | 0.9377 | 0.9404 |
 | ACC | 0.9181 | 0.8882 | 0.8621 | 0.9156 | 0.8821 | 0.8921 | 0.9254 | 0.9254 |
 | MCC | 0.7616 | 0.6742 | 0.5635 | 0.7460 | 0.6513 | 0.6872 | 0.7752 | 0.7725 |