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Table 1 The weights of the epigenomic, transcriptomic and proteomic variables extracted by msPLS from the Marfan data

From: Multiset sparse partial least squares path modeling for high dimensional omics data analysis

Methylation markersGene expression markersCytokine markers
SitewGene codewMarker codew
cg023945780.93AKAP40.65b NGF 460.43
cg203328660.96ANXA2P30.63CTACK 720.34
cg009064280.91ASMT_A0.83GRO a 610.31
cg050242910.93ATHL10.73HGF 620.21
cg050933180.95B9D20.66Hu Eotaxin 43-0.34
cg188501120.97C15orf520.76Hu FGF basic 440.46
cg074751170.95C17orf540.44Hu G CSF 570.61
cg075886140.94C1orf1700.8Hu GM CSF 340.43
cg103727010.94C9orf980.4Hu IFN g 210.28
cg01718788-0.9CALHM10.84Hu IL 10. 560.82
cg170611560.87CHTF180.81Hu IL 12 p70. 750.51
cg240002590.95CLEC4C0.39Hu IL 13 510.44
cg259142700.92COL4A60.69Hu IL 15 730.19
cg142039700.91CXorf50B0.84Hu IL 17 760.65
cg228590540.94CYP1A20.64Hu IL 1b 390.48
cg029274850.96DKFZp7790.85Hu IL 1ra 250.58
cg223892150.88FKRP0.85Hu IL 2 380.49
cg095706760.96FUZ0.71Hu IL 4 520.26
cg147516790.93GTF2IRD10.29Hu IL 5 330.29
cg244771020.94HIGD1B0.53Hu IL 6 190.04
cg248822200.93ICAM50.85Hu IL 7 740.44
cg256260120.95JPH30.88Hu IL 8 54-0.26
cg265025490.94LBP0.53Hu IL 9 770.42
cg000156990.93LOC64322-0.44Hu IP 10. 480.72
cg012816110.93LRRC500.66Hu MCP 1-0.04
cg076853900.95MGC42940.73Hu MIP 1a 550.23
cg265508720.97MT1DP0.43Hu MIP 1b 180.47
cg092367800.92MT1L0.51Hu PDGF bb 47-0.29
cg206185270.92NDUFAF2-0.47Hu RANTES 370.52
cg015460460.89OR11A1-0.53Hu VEGF 450.59
cg209995650.96PEX11G0.77IFN a2 200.15
cg111520120.87PIF10.88Il 12 p40 280.52
cg229582620.96PIN40.65Il 16 270.38
cg268208110.9POTEF-0.72Il 18 420.64
cg067317300.95PRIC2850.83Il 1a 630.14
cg085319980.94PSPN0.63Il 2Ra 130.56
cg196968910.92PTGR1-0.65Il 3 640.24
cg274954440.93REC80.72LIF 290.57
cg178408430.93RINL0.85M CSF 670.4
cg050628540.95ROM10.69MCP 3 260.42
  SLC16A30.78MIF 350.27
  SLPI-0.63MIG 140.63
  SNORA390.81SCF 650.23
  SPATA2L0.57SCGF b 780.42
  TMEM1790.79SDF 1a 220.24
  TNFRSF6B0.79TNF b 300.26
  TRBV12_30.46TRAIL 66-0.2
  UBQLNL0.65  
  UNQ64940.55  
  ZNF215-0.76  
  ZNF5740.74  
  ZNF6880.65  
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