Table 1 Visualizing an aligned base. Feature: information carried by the base on deletions
Feature | Description | |
|---|---|---|
1 | is-paired/is-not-paired | Is this read paired (1) or single (0)? |
2 | concordant/discordant paired | Is this read discordant (value 1) or not (value 0) |
3 | mapping-quality | Is the mapping quality higher than 20? Value is 0 or 1. |
4 | map-type | Is this read split (value 1) or not (value 0)? |