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Table 3 Average performance of different models

From: TooT-T: discrimination of transport proteins from non-transport proteins

 NameSensitivity (%)Specificity (%)Accuracy (%)MCC
SVMpsiPAAC*86.73 ±0.2987.99 ±0.5487.29 ±0.110.7448 ±0.0027
 blast-PAAC87.03 ±0.3786.08 ±0.2486.62 ±0.220.7299 ±0.0045
 psiAAC*82.69 ±0.2190.64 ±0.4186.13 ±0.150.7278 ±0.0036
 psiPseAAC*80.18 ±0.5891.51 ±0.4585.13 ±0.400.7125 ±0.0075
 blast-AAC84.97 ±0.3584.14 ±0.5284.61 ±0.220.6897 ±0.0050
 PSSM83.83 ±0.5982.03 ±0.5983.06 ±0.210.6579 ±0.0038
 blast-PseAAC84.59 ±0.5378.19 ±0.8281.81 ±0.350.6306 ±0.0077
 PseAAC80.45 ±0.4270.62 ±0.7076.19 ±0.440.5149 ±0.0098
 AAC79.73 ±0.5070.66 ±0.8975.79 ±0.510.5069 ±0.0101
 PAAC77.93 ±0.3172.14 ±0.5675.41 ±0.310.5014 ±0.0062
  1. The table shows mean±sd performance of ten different runs of the 10-CV, in ascending order of accuracy. The asterisk symbol (*) refers to the features used in TooT-T