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Table 4 Impact of incorporating evolutionary information on the accuracy

From: TooT-T: discrimination of transport proteins from non-transport proteins

Encoding

Accuracy(%)

blast-X to X

psi-X to X

psi-X to blast-X

X

X

blast-X

psi-X

increase(%)

increase(%)

increase(%)

AAC

75.79

84.61

86.13

+ 08.82

+ 10.34

+ 01.52

PAAC

75.41

86.62

87.29

+ 11.21

+ 11.88

+ 00.67

PseAAC

76.19

81.81

85.13

+ 05.62

+ 08.94

+ 03.32

Average

75.80

84.35

86.18

+ 08.55

+ 10.39

+ 01.84

  1. The table notes differences in accuracy and the percentage of improvement when incorporating different evolutionary information to the baseline compositions. The highest improvement in accuracy was achieved by psi-compositions, with an average improvement of 10.39%