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Table 5 Performance of annotation transfer by homology

From: TooT-T: discrimination of transport proteins from non-transport proteins

 

Name

Sensitivity (%)

Specificity (%)

Accuracy (%)

MCC

ATH

     
 

TCDB_exact

56.92

95.17

73.55

0.5440

 

TCDB_high

85.90

85.50

85.72

0.7112

 

TCDB_med

90.38

64.17

78.98

0.5737

  1. The table shows the performance homology annotation transfer with the training dataset using different thresholds. The best prediction power was achieved using the TCDB_high threshold. The predicted transporter from TCDB_exact was more reliable due to its high specificity. ATH= Annotation Transfer by Homology