Table 2 reconstructPPregion() timing results (in minutes) for different number of sequences and SNVs
From: perfectphyloR: An R package for reconstructing perfect phylogenies
| Â | Number of sequences | |||
|---|---|---|---|---|
Number of SNVs | 200 | 300 | 400 | 500 |
3000 | 17.66 | 21.47 | 26.07 | 26.38 |
4000 | 23.38 | 28.26 | 33.41 | 33.80 |
5000 | 29.99 | 34.82 | 41.40 | 41.87 |
6000 | 36.58 | 43.41 | 49.86 | 50.67 |
7000 | 43.17 | 51.68 | 58.72 | 59.42 |
8000 | 49.25 | 59.11 | 67.89 | 68.65 |
9000 | 55.63 | 66.75 | 77.00 | 77.92 |
10000 | 61.56 | 75.53 | 86.11 | 86.99 |