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Table 2 Comparative results of the minimal cut sets found for different target products in iJO1366 and iJO1366*. The given rounded percentages of subset and superset categories refer to the respective total number of minimal cut sets. The complete results can be found in Additional file 2

From: Automatic construction of metabolic models with enzyme constraints

Product

Ethanol

Succinate

Leucine

Valine

Model

iJO1366

iJO1366*

iJO1366

iJO1366*

iJO1366

iJO1366*

iJO1366

iJO1366*

#MCS

4538

7168

7801

9619

196

0

29,290

3712

#MCS up to size 3

0

0

0

0

0

0

0

0

#MCS of size 4

87

189

135

215

24

0

240

0

#MCS of size 5

678

871

1918

2148

32

0

3100

48

#MCS of size 6

3773

6108

5748

7196

140

0

25,950

3664

#MCS being subset of the other model’s MCS

11 (0.2%)

231 (3.2%)

21 (0.3%)

174 (1.8%)

0

0

0

0

#MCS being superset of the other model’s MCS

1516 (33.4%)

101 (1.4%)

1218 (15.6%)

42 (0.4%)

0

0

0

0

#MCS shared by both models

1899 (41.8%)

1899 (26.5%)

6141 (78.7%)

6141 (63.9%)

0

0

3280 (11.2%)

3280 (88.4%)

#MCS neither identical, superset or subset of the other model’s MCS

1112 (24.6%)

4937 (68.9%)

421 (5.4%)

3262 (33.9%)

196 (100%)

0

26,010 (88.8%)

432 (11.6%)