Table 2 The data using in the manuscript
From: BCREval: a computational method to estimate the bisulfite conversion ratio in WGBS
Biosample Type | Library_ID | ENCODE_ID (FASTQ) | Strand | Biosample summary |
|---|---|---|---|---|
Primary cell | ENCLB587BLQ | ENCFF055UXZ | + | Homo sapiens skeletal muscle myoblast |
ENCLB587BLQ | ENCFF764NTF | – | Homo sapiens skeletal muscle myoblast | |
ENCLB988SSO | ENCFF710XQC | + | Homo sapiens skeletal muscle myoblast | |
ENCLB988SSO | ENCFF331AID | – | Homo sapiens skeletal muscle myoblast | |
Cell line | ENCLB542OXH | ENCFF336KJH | + | Homo sapiens K562 |
ENCLB542OXH | ENCFF585HYM | – | Homo sapiens K562 | |
ENCLB890RFU | ENCFF211RZY | + | Homo sapiens HepG2 | |
ENCLB890RFU | ENCFF717MDZ | – | Homo sapiens HepG2 | |
ENCLB443JJF | ENCFF563QAT | + | Homo sapiens HepG2 | |
ENCLB443JJF | ENCFF954LFD | – | Homo sapiens HepG2 | |
Stem cell | ENCLB098BGY | ENCFF677BSB | + | Homo sapiens H1-hESC |
ENCLB098BGY | ENCFF800KIP | – | Homo sapiens H1-hESC | |
ENCLB167QQW | ENCFF311PSV | + | Homo sapiens H1-hESC | |
ENCLB167QQW | ENCFF335TUD | – | Homo sapiens H1-hESC | |
Tissue | ENCLB353RJB | ENCFF781BRM | + | Homo sapiens spleen male adult (37 years) |
ENCLB353RJB | ENCFF535VCB | – | Homo sapiens spleen male adult (37 years) | |
ENCLB585SDT | ENCFF283GDL | + | Mus musculus C57BL/6 liver adult (54–61 day) | |
ENCLB506AYR | ENCFF978EJO | + | Mus musculus C57BL/6 liver adult (54–61 day) | |
ENCLB760KHX | ENCFF348XNA | + | Mus musculus C57BL/6 liver adult (54–61 day) |