Skip to main content

Table 2 The ARI performance of cell-types prediction on different types of imputation data in three datasets. The PPI-based, pathway-based and fused imputation data were used in comparison

From: A flexible network-based imputing-and-fusing approach towards the identification of cell types from single-cell RNA-seq data

Dataset

Camp

Darmanis

Li

 

PPI

Pathway

Fusion

PPI

Pathway

Fusion

PPI

Pathway

Fusion

Raw

0.341

0.462

0.612

0.726

0.828

0.794

0.678

0.705

0.708

SAVER

0.464

0.445

0.578

0.854

0.881

0.858

0.680

0.720

0.680

scImpute

0.443

0.425

0.545

0.655

0.701

0.758

0.750

0.733

0.754

RESCUE

0.411

0.305

0.554

0.816

0.778

0.879

0.752

0.753

0.799

NetImpute

0.695

0.702

0.673

0.868

0.865

0.873

0.788

0.773

0.792

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us