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Table 1 Properties of Boolean models analyzed in manuscript

From: Exact solving and sensitivity analysis of stochastic continuous time Boolean models

# Model [ref]

nodes (dynamic)

Matrix (Mbytes, density)

calculation time

#1 [38]

13 (12)

0.9Mb, 7e-4

0.35-0.6 sec

#2 [39]

20 (16)

143Mb, 7e-6

0.4-3 sec

#3 [40]

20 (18)

173Mb, 8e-6

2.5-25sec

#4 [41]

20 (19)

173Mb, 9e-6

2-19 sec

#4.1 [39]

23 (19)

1.38Gb, 1e-6

2-30 sec

#4.2 [39]

23 (21)

1.44Gb, 1e-6

13-43 sec

  1. Calculation time is for solving a model with one set of initial conditions and transition rates on a computer with 8 cores (Intel(R) Xeon(R) CPU X5472 3.00GHz), without parallelization. In parenthesis in the column ‘nodes’ are the numbers of dynamic nodes, excluding input nodes.