PPAI: a web server for predicting protein-aptamer interactions

BMC Bioinformatics

Table 1 Performance comparison using different combination of machine classifier and features

Method	Sn	Sp	MCC	Acc	F1	AUC
Li’RF (Li’s features)	0.483	0.871	0.372	0.774	0.517	0.759
PPAI (Li’s features)	0.572	0.924	0.538	0.836	0.636	0.827
Li’RF (ours features)	0.458	0.915	0.422	0.800	0.535	0.783
PPAI (ours features)	0.641	0.903	0.557	0.842	0.664	0.849
Li’RF (Smote) (ours features)	0.648	0.818	0.441	0.775	0.592	0.801
PPAI (Smote) (ours features)	0.796	0.810	0.555	0.806	0.675	0.871

ISSN: 1471-2105