From: AllesTM: predicting multiple structural features of transmembrane proteins
Z-coordinates | Topology | Continuous flexibility | Two-state flexibility | |||
MAE | ACC | MAE | ACC | |||
RF | 9.1 | 0.83 | 0.67 | 0.68 | ||
GBM | 7.82 | 0.86 | 0.65 | 0.69 | ||
conv | 5.18 | 0.86 | 0.63 | 0.7 | ||
dconv | 4.45 | 0.88 | 0.63 | 0.7 | ||
LSTM | 3.71 | 0.89 | 0.63 | 0.7 | ||
AllesTM | 3.72 | 0.9 | 0.63 | 0.7 | ||
MEMSAT-SVM | 0.74 | |||||
PolyPhobiusa | 0.75/0.75 | |||||
SCAMPIa | 0.77/0.78 | |||||
PROFbval | 0.78 | 0.65 | ||||
PredyFlexy | 0.8 | |||||
Phi angles | Psi angles | Secondary structure | RSA monomer | RSA complex | RSA change | |
MAE | MAE | ACC | MAE | MAE | MAE | |
RF | 18.91 | 39.5 | 0.82 | 0.18 | 0.16 | 0.09 |
GBM | 18.5 | 35.93 | 0.84 | 0.17 | 0.15 | 0.09 |
conv | 16.93 | 28.75 | 0.85 | 0.16 | 0.14 | 0.07 |
dconv | 17.43 | 29.47 | 0.85 | 0.16 | 0.14 | 0.07 |
LSTM | 17.03 | 28.81 | 0.85 | 0.16 | 0.14 | 0.07 |
AllesTM | 17.34 | 30.41 | 0.86 | 0.15 | 0.14 | 0.08 |
PROFphd | 0.78 | |||||
PSIPRED | 0.87 | |||||
ANGLOR | 19.57 | 38.33 | ||||
SPINE X | 20.68 | 41.77 | 0.77 | 0.2 | 0.17 | |
SPOT-1D | 15.85 | 23.51 | 0.89 | 0.14 | 0.16 |